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» Using Multiple Alignments to Improve Gene Prediction
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133
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BMCBI
2008
117views more  BMCBI 2008»
15 years 3 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
BMCBI
2008
85views more  BMCBI 2008»
15 years 3 months ago
Merging microarray data from separate breast cancer studies provides a robust prognostic test
Background: There is an urgent need for new prognostic markers of breast cancer metastases to ensure that newly diagnosed patients receive appropriate therapy. Recent studies have...
Lei Xu, Aik Choon Tan, Raimond L. Winslow, Donald ...
130
Voted
BMCBI
2007
97views more  BMCBI 2007»
15 years 3 months ago
A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, hu
Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interp...
Rudi Alberts, Peter Terpstra, Menno Hardonk, Leoni...
FLAIRS
2010
15 years 6 months ago
CsMTL MLP For WEKA: Neural Network Learning with Inductive Transfer
We present context-sensitive Multiple Task Learning, or csMTL as a method of inductive transfer. It uses additional contextual inputs along with other input features when learning ...
Liangliang Tu, Benjamin Fowler, Daniel L. Silver
145
Voted
BMCBI
2007
118views more  BMCBI 2007»
15 years 3 months ago
A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of
Background: Most human genes produce several transcripts with different exon contents by using alternative promoters, alternative polyadenylation sites and alternative splice site...
Pierre de la Grange, Martin Dutertre, Margot Corre...