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IPPS
2008
IEEE
14 years 1 months ago
Large-scale experiment of co-allocation strategies for Peer-to-Peer supercomputing in P2P-MPI
High Performance computing generally involves some parallel applications to be deployed on the multiples resources used for the computation. The problem of scheduling the applicat...
Stéphane Genaud, Choopan Rattanapoka
ISPDC
2008
IEEE
14 years 1 months ago
Algorithms for Network Topology Discovery using End-to-End Measurements
Identifying and inferring performances of a network topology is a well known problem. Achieving this by using only end-to-end measurements at the application level is a method kno...
Laurent Bobelin, Traian Muntean
BMCBI
2007
120views more  BMCBI 2007»
13 years 7 months ago
Non-coding sequence retrieval system for comparative genomic analysis of gene regulatory elements
Background: Completion of the human genome sequence along with other species allows for greater understanding of the biochemical mechanisms and processes that govern healthy as we...
Sung Tae Doh, Yunyu Zhang, Matthew H. Temple, Li C...
MIDDLEWARE
2007
Springer
14 years 1 months ago
Using checkpointing to recover from poor multi-site parallel job scheduling decisions
Recent research in multi-site parallel job scheduling leverages user-provided estimates of job communication characteristics to effectively partition the job across multiple clus...
William M. Jones
BMCBI
2011
12 years 11 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...