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GLOBECOM
2007
IEEE
14 years 3 months ago
Parallel Search Trie-Based Scheme for Fast IP Lookup
—As data rates in the Internet increase, the Internet Protocol (IP) address lookup is required to be resolved in shorter resolution times. IP address lookup involves finding the...
Roberto Rojas-Cessa, Lakshmi Ramesh, Ziqian Dong, ...
BMCBI
2006
141views more  BMCBI 2006»
13 years 8 months ago
Identification of consensus RNA secondary structures using suffix arrays
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
Mohammad Anwar, Truong Nguyen, Marcel Turcotte
BMCBI
2002
109views more  BMCBI 2002»
13 years 8 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
EUROPAR
2008
Springer
13 years 10 months ago
A Search Engine Index for Multimedia Content
We present a distributed index data structure and algorithms devised to support parallel query processing of multimedia content in search engines. We present a comparative study wi...
Mauricio Marín, Veronica Gil Costa, Carolin...
BMCBI
2010
152views more  BMCBI 2010»
13 years 9 months ago
A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
Background: High-resolution tandem mass spectra can now be readily acquired with hybrid instruments, such as LTQ-Orbitrap and LTQ-FT, in high-throughput shotgun proteomics workflo...
Chongle Pan, Byung-Hoon Park, William H. McDonald,...