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BIBM
2008
IEEE
217views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Combining Hierarchical Inference in Ontologies with Heterogeneous Data Sources Improves Gene Function Prediction
The study of gene function is critical in various genomic and proteomic fields. Due to the availability of tremendous amounts of different types of protein data, integrating thes...
Xiaoyu Jiang, Naoki Nariai, Martin Steffen, Simon ...
BMCBI
2007
133views more  BMCBI 2007»
13 years 8 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
IJDAR
2010
110views more  IJDAR 2010»
13 years 7 months ago
Locating and parsing bibliographic references in HTML medical articles
The set of references that typically appear toward the end of journal articles is sometimes, though not always, a field in bibliographic (citation) databases. But even if referenc...
Jie Zou, Daniel X. Le, George R. Thoma
SIGMOD
2009
ACM
202views Database» more  SIGMOD 2009»
14 years 9 months ago
ZStream: a cost-based query processor for adaptively detecting composite events
Composite (or Complex) event processing (CEP) systems search sequences of incoming events for occurrences of userspecified event patterns. Recently, they have gained more attentio...
Yuan Mei, Samuel Madden
CLUSTER
2006
IEEE
14 years 2 months ago
MSSG: A Framework for Massive-Scale Semantic Graphs
This paper presents a middleware framework for storing, accessing and analyzing massive-scale semantic graphs. The framework, MSSG, targets scale-free semantic graphs with O(1012 ...
Timothy D. R. Hartley, Ümit V. Çataly&...