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» Using Preference Order in Ontologies
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BMCBI
2008
95views more  BMCBI 2008»
13 years 7 months ago
Unsupervised reduction of random noise in complex data by a row-specific, sorted principal component-guided method
Background: Large biological data sets, such as expression profiles, benefit from reduction of random noise. Principal component (PC) analysis has been used for this purpose, but ...
Joseph W. Foley, Fumiaki Katagiri
BMCBI
2007
141views more  BMCBI 2007»
13 years 7 months ago
HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing
Background: Correct temporal and spatial gene expression during metazoan development relies on combinatorial interactions between different transcription factors. As a consequence...
Erik Larsson, Per Lindahl, Petter Mostad
BMCBI
2007
115views more  BMCBI 2007»
13 years 7 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
EACL
2003
ACL Anthology
13 years 9 months ago
NLP for Indexing and Retrieval of Captioned Photographs
We present a text-based approach for the automatic indexing and retrieval of digital photographs taken at crime scenes. Our research prototype, SOCIS, goes beyond keyword-based ap...
Horacio Saggion, Katerina Pastra, Yorick Wilks
AH
2008
Springer
14 years 2 months ago
A Validation Framework for Formal Models in Adaptive Work-Integrated Learning
The focus of my thesis is on the development of a multi-method framework for the validation of formal models (domain model, user model, and teaching model) for adaptive work-integr...
Barbara Kump