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SCFBM
2008
151views more  SCFBM 2008»
13 years 8 months ago
Wndchrm - an open source utility for biological image analysis
Background: Biological imaging is an emerging field, covering a wide range of applications in biological and clinical research. However, while machinery for automated experimentin...
Lior Shamir, Nikita Orlov, D. Mark Eckley, Tomasz ...
BMCBI
2006
120views more  BMCBI 2006»
13 years 8 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu
ICC
2008
IEEE
167views Communications» more  ICC 2008»
14 years 3 months ago
Traceroute-Based Topology Inference without Network Coordinate Estimation
Abstract— Underlay topology information is important to construct efficient overlay networks. To achieve end-to-end network topology inference among a group of hosts, traceroute...
Xing Jin, Wanqing Tu, S.-H. Gary Chan
WADS
1997
Springer
89views Algorithms» more  WADS 1997»
14 years 23 days ago
Intractability of Assembly Sequencing: Unit Disks in the Plane
We consider the problem of removing a given disk from a collection of unit disks in the plane. At each step, we allow a disk to be removed by a collision-free translation to infin...
Michael H. Goldwasser, Rajeev Motwani
BMCBI
2007
86views more  BMCBI 2007»
13 years 8 months ago
Toxicogenomic analysis incorporating operon-transcriptional coupling and toxicant concentration-expression response: analysis of
Background: Deficiencies in microarray technology cause unwanted variation in the hybridization signal, obscuring the true measurements of intracellular transcript levels. Here we...
William O. Ward, Carol D. Swartz, Steffen Porwolli...