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BMCBI
2002
137views more  BMCBI 2002»
13 years 10 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
NAR
2007
95views more  NAR 2007»
13 years 9 months ago
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction
With the integration of the KEGG and Predictome databases as well as two search engines for coexpressed genes/proteins using data sets obtained from the Stanford Microarray Databa...
Zhenjun Hu, David M. Ng, Takuji Yamada, Chunnuan C...
GIS
2010
ACM
13 years 8 months ago
Ontuition: intuitive data exploration via ontology navigation
We present Ontuition, a system for mapping ontologies. Transforming data to a usable format for Ontuition involves recognizing and resolving data values corresponding to concepts ...
Marco D. Adelfio, Michael D. Lieberman, Hanan Same...
COLING
2010
13 years 5 months ago
Cloud Computing for Linguists
The system presented is a web application designed to aid linguistic research with data collection and online publishing. It is a service mainly for linguists and language experts...
Dorothee Beermann, Pavel Mihaylov
WWW
2007
ACM
14 years 10 months ago
Dynamic personalized pagerank in entity-relation graphs
Extractors and taggers turn unstructured text into entityrelation (ER) graphs where nodes are entities (email, paper, person, conference, company) and edges are relations (wrote, ...
Soumen Chakrabarti