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BMCBI
2008
130views more  BMCBI 2008»
13 years 8 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
ICDE
2007
IEEE
104views Database» more  ICDE 2007»
14 years 10 months ago
Indexing Uncertain Categorical Data
Uncertainty in categorical data is commonplace in many applications, including data cleaning, database integration, and biological annotation. In such domains, the correct value o...
Sarvjeet Singh, Chris Mayfield, Sunil Prabhakar, R...
ICCS
2009
Springer
14 years 3 months ago
Generating Empirically Optimized Composed Matrix Kernels from MATLAB Prototypes
The development of optimized codes is time-consuming and requires extensive architecture, compiler, and language expertise, therefore, computational scientists are often forced to ...
Boyana Norris, Albert Hartono, Elizabeth R. Jessup...
SDM
2007
SIAM
121views Data Mining» more  SDM 2007»
13 years 10 months ago
Mining Visual and Textual Data for Constructing a Multi-Modal Thesaurus
We propose an unsupervised approach to learn associations between continuous-valued attributes from different modalities. These associations are used to construct a multi-modal t...
Hichem Frigui, Joshua Caudill
NAR
2002
80views more  NAR 2002»
13 years 8 months ago
PRINTS and PRINTS-S shed light on protein ancestry
The PRINTS database houses a collection of protein fingerprints. These may be used to make family and tentative functional assignments for uncharacterised sequences. The September...
Terri K. Attwood, Martin J. Blythe, Darren R. Flow...