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BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
GECCO
2007
Springer
189views Optimization» more  GECCO 2007»
14 years 1 months ago
A more bio-plausible approach to the evolutionary inference of finite state machines
With resemblance of finite-state machines to some biological mechanisms in cells and numerous applications of finite automata in different fields, this paper uses analogies an...
Hooman Shayani, Peter J. Bentley
KDD
2008
ACM
178views Data Mining» more  KDD 2008»
14 years 7 months ago
Training structural svms with kernels using sampled cuts
Discriminative training for structured outputs has found increasing applications in areas such as natural language processing, bioinformatics, information retrieval, and computer ...
Chun-Nam John Yu, Thorsten Joachims
GECCO
2006
Springer
173views Optimization» more  GECCO 2006»
13 years 11 months ago
Pareto-coevolutionary genetic programming classifier
The conversion and extension of the Incremental ParetoCoevolution Archive algorithm (IPCA) into the domain of Genetic Programming classifier evolution is presented. In order to ac...
Michal Lemczyk, Malcolm I. Heywood
KDD
2009
ACM
191views Data Mining» more  KDD 2009»
14 years 18 hour ago
Improving data mining utility with projective sampling
Overall performance of the data mining process depends not just on the value of the induced knowledge but also on various costs of the process itself such as the cost of acquiring...
Mark Last