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BIBM
2009
IEEE
151views Bioinformatics» more  BIBM 2009»
14 years 2 months ago
Detection of Gene Orthology Based on Protein-Protein Interaction Networks
Abstract—Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our unde...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
BMCBI
2007
129views more  BMCBI 2007»
13 years 7 months ago
Inferring cellular networks - a review
In this review we give an overview of computational and statistical methods to reconstruct cellular networks. Although this area of research is vast and fast developing, we show t...
Florian Markowetz, Rainer Spang
BIOADIT
2004
Springer
14 years 24 days ago
Analysis of Responses of Complex Bionetworks to Changes in Environmental Conditions
Abstract. The responses of flexible bionetworks to extreme environmental changes were studied in several microorganisms. Gene and metabolic networks markedly changed with osmotic ...
Hiroshi Shimizu, Takashi Hirasawa, Keisuke Nagahis...
BIRD
2008
Springer
158views Bioinformatics» more  BIRD 2008»
13 years 9 months ago
A Computational Method for Reconstructing Gapless Metabolic Networks
Abstract. We propose a computational method for reconstructing metabolic networks. The method utilizes optimization techniques and graph traversal algorithms to discover a set of b...
Esa Pitkänen, Ari Rantanen, Juho Rousu, Esko ...
IMC
2005
ACM
14 years 29 days ago
Improving Sketch Reconstruction Accuracy Using Linear Least Squares Method
Sketch is a sublinear space data structure that allows one to approximately reconstruct the value associated with any given key in an input data stream. It is the basis for answer...
Gene Moo Lee, Huiya Liu, Young Yoon, Yin Zhang