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BMCBI
2007
133views more  BMCBI 2007»
13 years 9 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
KDD
2002
ACM
147views Data Mining» more  KDD 2002»
14 years 9 months ago
The Impact of Site Structure and User Environment on Session Reconstruction in Web Usage Analysis
The analysis of user behavior on the Web presupposes a reliable reconstruction of the users' navigational activities. Cookies and server-generated session identifiers have be...
Bettina Berendt, Bamshad Mobasher, Miki Nakagawa, ...
CHI
2008
ACM
14 years 9 months ago
There's always one!: modelling outlying user performance
Informal analysis of many usability tests suggests that there is regularly one participant that is substantially slower than all the others. Moreover, such outliers are more extre...
Julie Schiller, Paul A. Cairns
BMCBI
2006
126views more  BMCBI 2006»
13 years 9 months ago
A Regression-based K nearest neighbor algorithm for gene function prediction from heterogeneous data
Background: As a variety of functional genomic and proteomic techniques become available, there is an increasing need for functional analysis methodologies that integrate heteroge...
Zizhen Yao, Walter L. Ruzzo
ALMOB
2006
155views more  ALMOB 2006»
13 years 9 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg