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» Using probabilistic model checking in systems biology
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ICCD
1995
IEEE
109views Hardware» more  ICCD 1995»
14 years 25 days ago
Verifying the performance of the PCI local bus using symbolic techniques
Symbolic model checking is a successful technique for checking properties of large finite-state systems. This method has been used to verify a number of real-world hardware desig...
Sérgio Vale Aguiar Campos, Edmund M. Clarke...
IANDC
2011
127views more  IANDC 2011»
13 years 4 months ago
On the consistency, expressiveness, and precision of partial modeling formalisms
Partial transition systems support abstract model checking of complex temporal propercombining both over- and under-approximatingabstractions into a single model. Over the years, ...
Ou Wei, Arie Gurfinkel, Marsha Chechik
RECOMB
2007
Springer
14 years 9 months ago
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
Abstract. An important problem in biology is to understand correspondences between mRNA microarray levels and mass spectrometry peptide counts. Recently, a compendium of mRNA expre...
Anitha Kannan, Andrew Emili, Brendan J. Frey
DFG
2004
Springer
14 years 1 months ago
Modeling and Formal Verification of Production Automation Systems
This paper presents the real-time model checker RAVEN and related theoretical background. RAVEN augments the efficiency of traditional symbolic model checking with possibilities to...
Jürgen Ruf, Roland J. Weiss, Thomas Kropf, Wo...
BMCBI
2008
226views more  BMCBI 2008»
13 years 9 months ago
ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
Background: New systems biology studies require researchers to understand how interplay among myriads of biomolecular entities is orchestrated in order to achieve high-level cellu...
Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harr...