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BMCBI
2010
149views more  BMCBI 2010»
13 years 8 months ago
KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information o
Background: The amount of available biological information is rapidly increasing and the focus of biological research has moved from single components to networks and even larger ...
Stephanie Heinen, Bernhard Thielen, Dietmar Schomb...
SISAP
2010
IEEE
135views Data Mining» more  SISAP 2010»
13 years 7 months ago
Improving the similarity search of tandem mass spectra using metric access methods
In biological applications, the tandem mass spectrometry is a widely used method for determining protein and peptide sequences from an ”in vitro” sample. The sequences are not...
Jiri Novák, Tomás Skopal, David Hoks...
BMCBI
2005
292views more  BMCBI 2005»
13 years 8 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
BMCBI
2010
139views more  BMCBI 2010»
13 years 8 months ago
TOPSAN: a collaborative annotation environment for structural genomics
Background: Many protein structures determined in high-throughput structural genomics centers, despite their significant novelty and importance, are available only as PDB depositi...
Dana Weekes, S. Sri Krishna, Constantina Bakolitsa...
KCAP
2009
ACM
14 years 3 months ago
Biomedical knowledge engineering tools based on experimental design: a case study based on neuroanatomical tract-tracing experim
Curating information from the literature for storage in databases is a crucial task in biological research, and many groups assign a particular person or team to that process. We ...
Gully A. P. C. Burns, Thomas A. Russ