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» Validating associations in biological databases
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BMCBI
2010
155views more  BMCBI 2010»
13 years 10 months ago
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
Background: In the study of cancer genomics, gene expression microarrays, which measure thousands of genes in a single assay, provide abundant information for the investigation of...
Fan Shi, Christopher Leckie, Geoff MacIntyre, Izha...
BMCBI
2006
140views more  BMCBI 2006»
13 years 10 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
CIBCB
2009
IEEE
13 years 11 months ago
A framework for the application of decision trees to the analysis of SNPs data
Data mining is the analysis of experimental datasets to extract trends and relationships that can be meaningful for the user. In genetic studies these techniques have revealed inte...
Linda Fiaschi, Jonathan M. Garibaldi, Natalio Kras...
BMCBI
2010
129views more  BMCBI 2010»
13 years 10 months ago
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships
Background: Biological knowledge is represented in scientific literature that often describes the function of genes/ proteins (bioentities) in terms of their interactions (biointe...
Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan...
BMCBI
2007
227views more  BMCBI 2007»
13 years 10 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...