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» Validation of protein models by a neural network approach
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BMCBI
2007
130views more  BMCBI 2007»
13 years 9 months ago
A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
SAB
2010
Springer
117views Optimization» more  SAB 2010»
13 years 7 months ago
Indirectly Encoding Neural Plasticity as a Pattern of Local Rules
Biological brains can adapt and learn from past experience. In neuroevolution, i.e. evolving artificial neural networks (ANNs), one way that agents controlled by ANNs can evolve t...
Sebastian Risi, Kenneth O. Stanley
BMCBI
2008
220views more  BMCBI 2008»
13 years 9 months ago
Gene prediction in metagenomic fragments: A large scale machine learning approach
Background: Metagenomics is an approach to the characterization of microbial genomes via the direct isolation of genomic sequences from the environment without prior cultivation. ...
Katharina J. Hoff, Maike Tech, Thomas Lingner, Rol...
ICANN
2005
Springer
14 years 2 months ago
Accurate and Robust Image Superresolution by Neural Processing of Local Image Representations
Image superresolution involves the processing of an image sequence to generate a still image with higher resolution. Classical approaches, such as bayesian MAP methods, require ite...
Carlos Miravet, Francisco de Borja Rodrígue...
BICOB
2009
Springer
14 years 3 months ago
A Bayesian Approach to High-Throughput Biological Model Generation
Abstract. With the availability of hundreds and soon-to-be thousands of complete genomes, the construction of genome-scale metabolic models for these organisms has attracted much a...
Xinghua Shi, Rick L. Stevens