Abstract. We present a solution to the problem of performing approximate pattern matching on compressed text. The format we choose is the Ziv-Lempel family, speci cally the LZ78 an...
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...
Abstract: Approximate string matching is fundamental to bioinformatics, and has been the subject of numerous FPGA acceleration studies. We address issues with respect to FPGA imple...
Martin C. Herbordt, Josh Model, Yongfeng Gu, Bhara...
Abstract. If the genetic maps of two species are modelled as permutations of (homologous) genes, the number of chromosomal rearrangements in the form of deletions, block moves, inv...
This paper introduces a framework for clarifying and formalizing the duplicate document detection problem. Four distinct models are presented, each with a corresponding algorithm ...