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» Verification of Test Suites
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BMCBI
2007
131views more  BMCBI 2007»
13 years 11 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
BMCBI
2007
134views more  BMCBI 2007»
13 years 11 months ago
A framework for significance analysis of gene expression data using dimension reduction methods
Background: The most popular methods for significance analysis on microarray data are well suited to find genes differentially expressed across predefined categories. However, ide...
Lars Halvor Gidskehaug, Endre Anderssen, Arnar Fla...
BMCBI
2008
146views more  BMCBI 2008»
13 years 11 months ago
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
Background: Recent approaches for predicting the three-dimensional (3D) structure of proteins such as de novo or fold recognition methods mostly rely on simplified energy potentia...
Jean-François Taly, Antoine Marin, Jean-Fra...
CPHYSICS
2006
103views more  CPHYSICS 2006»
13 years 11 months ago
WATERWAVES: wave particles dynamics on a complex triatomic potential
The WATERWAVES program suite performs complex scattering calculations by propagating a wave packet in a complex, full-dimensional potential for non-rotating (J = 0) but vibrating ...
Simone Taioli, Jonathan Tennyson
JAIR
2006
90views more  JAIR 2006»
13 years 11 months ago
Engineering Benchmarks for Planning: the Domains Used in the Deterministic Part of IPC-4
In a field of research about general reasoning mechanisms, it is essential to have appropriate benchmarks. Ideally, the benchmarks should reflect possible applications of the deve...
Jörg Hoffmann, Stefan Edelkamp, Sylvie Thi&ea...