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BMCBI
2006
100views more  BMCBI 2006»
13 years 7 months ago
DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions
Background: Many genome projects are left unfinished due to complex, repeated regions. Finishing is the most time consuming step in sequencing and current finishing tools are not ...
Erik Arner, Martti T. Tammi, Anh-Nhi Tran, Ellen K...
BMCBI
2010
134views more  BMCBI 2010»
13 years 7 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...
BMCBI
2007
89views more  BMCBI 2007»
13 years 7 months ago
Comparing segmentations by applying randomization techniques
Background: There exist many segmentation techniques for genomic sequences, and the segmentations can also be based on many different biological features. We show how to evaluate ...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
PLDI
2006
ACM
14 years 1 months ago
Optimizing memory transactions
Atomic blocks allow programmers to delimit sections of code as ‘atomic’, leaving the language’s implementation to enforce atomicity. Existing work has shown how to implement...
Timothy L. Harris, Mark Plesko, Avraham Shinnar, D...
ISM
2006
IEEE
173views Multimedia» more  ISM 2006»
13 years 7 months ago
Automatic Capture of Significant Points in a Computer Based Presentation
We describe an automatic classroom capture system that detects and records significant (stable) points in lectures by sampling and analyzing a sequence of screen capture frames fr...
Paul E. Dickson, W. Richards Adrion, Allen R. Hans...