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» Visualizations for taxonomic and phylogenetic trees
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NAR
2006
120views more  NAR 2006»
13 years 7 months ago
TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
BIBM
2008
IEEE
144views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
PhyQL: A Web-Based Phylogenetic Visual Query Engine
Biologists are often interested to query published phylogenetic data for research purposes. PhyQL, a web-based visual phylogenetic query engine, can be quite useful on this regard...
Shahriyar Hossain, Munirul Islam, Jesmin, Hasan M....
APVIS
2004
13 years 9 months ago
Optimal Leaf Ordering for Two and a Half Dimensional Phylogenetic Tree Visualisation
Two and a half dimensional graph visualisation is the stacking of a set of related graphs into the third dimension to support visual comparison. A new aesthetic criterion is intro...
Tim Dwyer, Falk Schreiber
BMCBI
2007
125views more  BMCBI 2007»
13 years 7 months ago
Identification of discriminative characteristics for clusters from biologic data with InforBIO software
Background: There are a number of different methods for generation of trees and algorithms for phylogenetic analysis in the study of bacterial taxonomy. Genotypic information, suc...
Naoto Tanaka, Masataka Uchino, Satoru Miyazaki, Hi...
BMCBI
2006
150views more  BMCBI 2006»
13 years 7 months ago
TreeDyn: towards dynamic graphics and annotations for analyses of trees
Background: Analyses of biomolecules for biodiversity, phylogeny or structure/function studies often use graphical tree representations. Many powerful tree editors are now availab...
François Chevenet, Christine Brun, Anne-Lau...