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BMCBI
2010
102views more  BMCBI 2010»
13 years 10 months ago
Quantized correlation coefficient for measuring reproducibility of ChIP-chip data
Background: Chromatin immunoprecipitation followed by microarray hybridization (ChIP-chip) is used to study protein-DNA interactions and histone modifications on a genome-scale. T...
Shouyong Peng, Mitzi I. Kuroda, Peter J. Park
FUIN
2002
108views more  FUIN 2002»
13 years 10 months ago
Approximate Entropy Reducts
We use information entropy measure to extend the rough set based notion of a reduct. We introduce the Approximate Entropy Reduction Principle (AERP). It states that any simplificat...
Dominik Slezak
BMCBI
2007
173views more  BMCBI 2007»
13 years 10 months ago
Recursive Cluster Elimination (RCE) for classification and feature selection from gene expression data
Background: Classification studies using gene expression datasets are usually based on small numbers of samples and tens of thousands of genes. The selection of those genes that a...
Malik Yousef, Segun Jung, Louise C. Showe, Michael...
BMCBI
2007
123views more  BMCBI 2007»
13 years 10 months ago
Normalization and experimental design for ChIP-chip data
Background: Chromatin immunoprecipitation on tiling arrays (ChIP-chip) has been widely used to investigate the DNA binding sites for a variety of proteins on a genome-wide scale. ...
Shouyong Peng, Artyom A. Alekseyenko, Erica Larsch...
ICDCS
1999
IEEE
14 years 2 months ago
Run-time Detection in Parallel and Distributed Systems: Application to Safety-Critical Systems
There is growing interest in run-time detection as parallel and distributed systems grow larger and more complex. This work targets run-time analysis of complex, interactive scien...
Beth Plale, Karsten Schwan