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ASWEC
2008
IEEE
13 years 11 months ago
Root Cause Analysis Using Sequence Alignment and Latent Semantic Indexing
Automatic identification of software faults has enormous practical significance. This requires characterizing program execution behavior. Equally important is the aspect of diagno...
R. P. Jagadeesh Chandra Bose, U. Suresh
ICST
2009
IEEE
14 years 4 months ago
Test Input Generation Using UML Sequence and State Machines Models
We propose a novel testing approach that combines information from UML sequence models and state machine models. Current approaches that rely solely on sequence models do not cons...
Aritra Bandyopadhyay, Sudipto Ghosh
BMCBI
2007
153views more  BMCBI 2007»
13 years 9 months ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte
BMCBI
2008
99views more  BMCBI 2008»
13 years 9 months ago
Binning sequences using very sparse labels within a metagenome
Background: In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most of the cu...
Chon-Kit Kenneth Chan, Arthur L. Hsu, Saman K. Hal...
BMCBI
2008
114views more  BMCBI 2008»
13 years 9 months ago
Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale represen
Background: With the amount of influenza genome sequence data growing rapidly, researchers need machine assistance in selecting datasets and exploring the data. Enhanced visualiza...
Leonid Zaslavsky, Yiming Bao, Tatiana A. Tatusova