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» Web-Based Genomic Information Integration with Gene Ontology
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BMCBI
2004
144views more  BMCBI 2004»
13 years 8 months ago
GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes
Background: The function of a novel gene product is typically predicted by transitive assignment of annotation from similar sequences. We describe a novel method, GOtcha, for pred...
David M. A. Martin, Matthew Berriman, Geoffrey J. ...
NAR
2008
174views more  NAR 2008»
13 years 7 months ago
miRGator: an integrated system for functional annotation of microRNAs
MicroRNAs (miRNAs) constitute an important class of regulators that are involved in various cellular and disease processes. However, the functional significance of each miRNA is m...
Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk ...
NAR
2010
111views more  NAR 2010»
13 years 3 months ago
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional pr
Babelomics is a response to the growing necessity of integrating and analyzing different types of genomic data in an environment that allows an easy functional interpretation of t...
Ignacio Medina, José Carbonell, Luis Pulido...
AIME
2007
Springer
14 years 2 months ago
Interpreting Gene Expression Data by Searching for Enriched Gene Sets
This paper presents a novel method integrating gene-gene interaction information and Gene Ontology for the construction of new gene sets that are potentially enriched. Enrichment o...
Igor Trajkovski, Nada Lavrac
NAR
2008
122views more  NAR 2008»
13 years 8 months ago
EPGD: a comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information
Gene duplication is common in all three domains of life, especially in eukaryotic genomes. The duplicates provide new material for the action of evolutionary forces such as select...
Guohui Ding, Yan Sun, Hong Li, Zhen Wang, Haiwei F...