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JCC
2011
133views more  JCC 2011»
13 years 5 months ago
MIBPB: A software package for electrostatic analysis
: The Poisson–Boltzmann equation (PBE) is an established model for the electrostatic analysis of biomolecules. The development of advanced computational techniques for the soluti...
Duan Chen, Zhan Chen, Changjun Chen, Weihua Geng, ...
JCC
2011
87views more  JCC 2011»
13 years 5 months ago
Determining equilibrium constants for dimerization reactions from molecular dynamics simulations
Abstract: With today’s available computer power, free energy calculations from equilibrium molecular dynamics simulations “via counting” become feasible for an increasing num...
Djurre H. De Jong, Lars V. Schäfer, Alex H. D...
JCNS
2011
87views more  JCNS 2011»
13 years 5 months ago
Information-geometric measure of 3-neuron firing patterns characterizes scale-dependence in cortical networks
To understand the functional connectivity of neural networks, it is important to develop simple and incisive descriptors of multineuronal firing patterns. Analysis at the pairwise...
Ifije E. Ohiorhenuan, Jonathan D. Victor
JCO
2011
115views more  JCO 2011»
13 years 5 months ago
Approximation scheme for restricted discrete gate sizing targeting delay minimization
Discrete gate sizing is a critical optimization in VLSI circuit design. Given a set of available gate sizes, discrete gate sizing problem asks to assign a size to each gate such th...
Chen Liao, Shiyan Hu
JCSS
2011
154views more  JCSS 2011»
13 years 5 months ago
Model interoperability via Model Driven Development
It is widely recognised that software development is a complex process. Among the factors that contribute to its inherent complexity is the gap between the design and the formal a...
Mohamed Ariff Ameedeen, Behzad Bordbar, Rachid Ana...
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