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BMCBI
2010
159views more  BMCBI 2010»
13 years 10 months ago
Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
Background: Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods ha...
Alvaro J. González, Li Liao
HICSS
2003
IEEE
171views Biometrics» more  HICSS 2003»
14 years 3 months ago
Improving the Efficiency of Interactive Sequential Pattern Mining by Incremental Pattern Discovery
The discovery of sequential patterns, which extends beyond frequent item-set finding of association rule mining, has become a challenging task due to its complexity. Essentially, ...
Ming-Yen Lin, Suh-Yin Lee
BMCBI
2010
137views more  BMCBI 2010»
13 years 10 months ago
Biana: a software framework for compiling biological interactions and analyzing networks
Background: The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature sy...
Javier Garcia-Garcia, Emre Guney, Ramon Aragues, J...
BMCBI
2007
148views more  BMCBI 2007»
13 years 10 months ago
BPhyOG: An interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes
Background: Overlapping genes (OGs) in bacterial genomes are pairs of adjacent genes of which the coding sequences overlap partly or entirely. With the rapid accumulation of seque...
Yingqin Luo, Cong Fu, Da-Yong Zhang, Kui Lin
SIGMOD
2004
ACM
124views Database» more  SIGMOD 2004»
14 years 3 months ago
An Interactive Clustering-based Approach to Integrating Source Query interfaces on the Deep Web
An increasing number of data sources now become available on the Web, but often their contents are only accessible through query interfaces. For a domain of interest, there often ...
Wensheng Wu, Clement T. Yu, AnHai Doan, Weiyi Meng