Background: The ability to visualize genomic features and design experimental assays that can target specific regions of a genome is essential for modern biology. To assist in the...
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
In this paper, we cast the image-ranking problem into the task of identifying "authority" nodes on an inferred visual similarity graph and propose an algorithm to analyz...
In this paper, we propose a scalable instant code clone search engine for large-scale software repositories. While there are commercial code search engines available, they treat s...
Motivation: Non-coding RNAs (ncRNAs)--functional RNA molecules not coding for proteins--are grouped into hundreds of families of homologs. To find new members of an ncRNA gene fam...