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ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 15 days ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
BMCBI
2008
214views more  BMCBI 2008»
13 years 8 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
FPL
2004
Springer
115views Hardware» more  FPL 2004»
14 years 7 days ago
Optimal Routing-Conscious Dynamic Placement for Reconfigurable Devices
We describe algorithmic results for two crucial aspects of allocating resources on computational hardware devices with partial reconfigurability. By using methods from the field of...
Ali Ahmadinia, Christophe Bobda, Sándor P. ...
DDECS
2007
IEEE
143views Hardware» more  DDECS 2007»
14 years 2 months ago
Fault Injection and Simulation for Fault Tolerant Reconfigurable Duplex System
– The implementation and the fault simulation technique for the highly reliable digital design using two FPGAs under a processor control is presented. Two FPGAs are used for dupl...
Pavel Kubalík, Jirí Kvasnicka, Hana ...
ASAP
2008
IEEE
117views Hardware» more  ASAP 2008»
13 years 10 months ago
Reconfigurable acceleration of microphone array algorithms for speech enhancement
Microphone arrays play an important role in noise reduction and speech enhancement. Their algorithms are based on beamforming, which reduces the level of localized and ambient noi...
Ka Fai Cedric Yiu, Chun Hok Ho, Nedelko Grbic, Yao...