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BIOINFORMATICS
2006
87views more  BIOINFORMATICS 2006»
13 years 9 months ago
COPASI - a COmplex PAthway SImulator
Simulation and modeling is becoming one of the standard approaches to understand complex biochemical processes. Therefore, there is a big need for software tools that allow access...
Stefan Hoops, Sven Sahle, Ralph Gauges, Christine ...
BIOINFORMATICS
2005
89views more  BIOINFORMATICS 2005»
13 years 9 months ago
Doelan: a solution for quality control monitoring of microarray production
: Doelan is an automated tool to check the quality of produced DNA microarrays. This software is based on the execution of test suites on quality control data to validate batches o...
Laurent Jourdren, Stéphane Le Crom
BIOINFORMATICS
2004
59views more  BIOINFORMATICS 2004»
13 years 9 months ago
Efficient selection of unique and popular oligos for large EST databases
EST databases have grown exponentially in recent years and now represent the largest collection of genetic sequences. An important application of these databases is that they conta...
Jie Zheng, Timothy J. Close, Tao Jiang, Stefano Lo...
BIOINFORMATICS
2000
99views more  BIOINFORMATICS 2000»
13 years 9 months ago
GeneRAGE: a robust algorithm for sequence clustering and domain detection
Motivation: Efficient, accurate and automatic clustering of large protein sequence datasets, such as complete proteomes, into families, according to sequence similarity. Detection...
Anton J. Enright, Christos A. Ouzounis
BIOINFORMATICS
2002
123views more  BIOINFORMATICS 2002»
13 years 9 months ago
Making sense of microarray data distributions
Motivation: Typical analysis of microarray data has focused on spot by spot comparisons within a single organism. Less analysis has been done on the comparison of the entire distr...
David C. Hoyle, Magnus Rattray, Ray Jupp, Andy Bra...