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NAR
2010
116views more  NAR 2010»
13 years 4 months ago
The European Bioinformatics Institute's data resources
As the amount of biological data grows, so does the need for biologists to store and access this information in central repositories in a free and unambiguous manner. The European...
Catherine Brooksbank, Graham Cameron, Janet M. Tho...
PROCEDIA
2010
138views more  PROCEDIA 2010»
13 years 4 months ago
Using the reconfigurable massively parallel architecture COPACOBANA 5000 for applications in bioinformatics
Currently several computational problems require high processing power to handle huge amounts of data, although underlying core algorithms appear to be rather simple. Especially i...
Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Car...
BIOINFORMATICS
2010
87views more  BIOINFORMATICS 2010»
13 years 10 months ago
Discriminatory power of RNA family models
Motivation: RNA family models group nucleotide sequences that share a common biological function. These models can be used to find new sequences belonging to the same family. To s...
Christian Höner zu Siederdissen, Ivo L. Hofac...
BIOINFORMATICS
2010
92views more  BIOINFORMATICS 2010»
13 years 10 months ago
A computational genomics pipeline for prokaryotic sequencing projects
Andrey Kislyuk, Lee S. Katz, Sonia Agrawal, Matthe...
BIOINFORMATICS
2010
250views more  BIOINFORMATICS 2010»
13 years 8 months ago
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Summary: High-throughput RNA sequencing (RNA-seq) is rapidly emerging as a major quantitative transcriptome profiling platform. Here we present DEGseq, an R package to identify di...
Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xu...