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BMCBI
2011
13 years 4 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
CORR
2011
Springer
181views Education» more  CORR 2011»
13 years 4 months ago
Compressed String Dictionaries
The problem of storing a set of strings – a string dictionary – in compact form appears naturally in many cases. While classically it has represented a small part of the whole ...
Nieves R. Brisaboa, Rodrigo Cánovas, Miguel...
NAR
2011
226views Computer Vision» more  NAR 2011»
13 years 14 days ago
The International Nucleotide Sequence Database Collaboration
Under the International Nucleotide Sequence Database Collaboration (INSDC; http://www.insdc. org), globally comprehensive public domain nucleotide sequence is captured, preserved ...
Guy Cochrane, Ilene Karsch-Mizrachi, Yasukazu Naka...
NAR
2011
236views Computer Vision» more  NAR 2011»
13 years 14 days ago
The catfish genome database cBARBEL: an informatic platform for genome biology of ictalurid catfish
The catfish genome database, cBARBEL (abbreviated from catfish Breeder And Researcher Bioinformatics Entry Location) is an online open-access database for genome biology of ictalu...
Jianguo Lu, Eric Peatman, Qing Yang, Shaolin Wang,...
NAR
2011
194views Computer Vision» more  NAR 2011»
13 years 14 days ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...