Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Motivation: The double cut and join operation (abbreviated as DCJ) has been extensively used for genomic rearrangement. Although the DCJ distance between signed genomes with both ...
Sticker complexes are a a formal graph-based data model for a restricted class of DNA complexes, motivated by potential applications to databases. This data model allows for a pure...
Robert Brijder, Joris J. M. Gillis, Jan Van den Bu...
Abstract. This document is a preprint of the following publication: Bioinformatics (2011) 27(8): 1166-1167. Algorithms for sparse data require fast search and subset selection capa...
Marc Kirchner, Buote Xu, Hanno Steen, Judith A. J....