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BMCBI
2005
92views more  BMCBI 2005»
13 years 11 months ago
Filtering high-throughput protein-protein interaction data using a combination of genomic features
Background: Protein-protein interaction data used in the creation or prediction of molecular networks is usually obtained from large scale or high-throughput experiments. This exp...
Ashwini Patil, Haruki Nakamura
BMCBI
2005
96views more  BMCBI 2005»
13 years 11 months ago
Comparison of codon usage measures and their applicability in prediction of microbial gene expressivity
Background: There are a number of methods (also called: measures) currently in use that quantify codon usage in genes. These measures are often influenced by other sequence proper...
Fran Supek, Kristian Vlahovicek
BMCBI
2005
144views more  BMCBI 2005»
13 years 11 months ago
GeneRank: Using search engine technology for the analysis of microarray experiments
Background: Interpretation of simple microarray experiments is usually based on the fold-change of gene expression between a reference and a "treated" sample where the t...
Julie L. Morrison, Rainer Breitling, Desmond J. Hi...
BMCBI
2005
119views more  BMCBI 2005»
13 years 11 months ago
Proceedings of the Second Annual Conference of the MidSouth Computational Biology and Bioinformatics Society
The MCBIOS 2004 conference brought together regional researchers and students in biology, computer science and bioinformatics on October 7th-9th 2004 to present their latest work....
Jonathan D. Wren, William Slikker Jr.
BMCBI
2005
92views more  BMCBI 2005»
13 years 11 months ago
A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles
Background: We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protoco...
Andreas Möglich, Daniel Weinfurtner, Till Mau...