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BMCBI
2007
114views more  BMCBI 2007»
15 years 4 months ago
False occurrences of functional motifs in protein sequences highlight evolutionary constraints
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
Allegra Via, Pier Federico Gherardini, Enrico Ferr...
BMCBI
2008
135views more  BMCBI 2008»
15 years 4 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
EJC
2010
15 years 4 months ago
On loop identities that can be obtained by a nuclear identification
We start by describing all the varieties of loops Q that can be defined by autotopisms x, x Q, where x is a composition of two triples, each of which becomes an autotopism when th...
Ales Drápal, Premysl Jedlicka
AIR
2006
124views more  AIR 2006»
15 years 3 months ago
Expressiveness of temporal query languages: on the modelling of intervals, interval relationships and states
Abstract Storing and retrieving time-related information are important, or even critical, tasks on many areas of Computer Science (CS) and in particular for Artificial Intelligence...
Rodolfo Sabás Gómez, Juan Carlos Aug...
ALMOB
2006
138views more  ALMOB 2006»
15 years 3 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh