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JAL
2007
95views more  JAL 2007»
13 years 9 months ago
Computing shortest paths with uncertainty
Abstract. We consider the problem of estimating the length of a shortest path in a DAG whose edge lengths are known only approximately but can be determined exactly at a cost. Init...
Tomás Feder, Rajeev Motwani, Liadan O'Calla...
BMCBI
2007
156views more  BMCBI 2007»
13 years 9 months ago
Accuracy of structure-based sequence alignment of automatic methods
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
Changhoon Kim, Byungkook Lee
BMCBI
2007
136views more  BMCBI 2007»
13 years 9 months ago
Comparison of protein structures by growing neighborhood alignments
Background: Design of protein structure comparison algorithm is an important research issue, having far reaching implications. In this article, we describe a protein structure com...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
BMCBI
2008
92views more  BMCBI 2008»
13 years 9 months ago
OpenMS - An open-source software framework for mass spectrometry
Background: Mass spectrometry is an essential analytical technique for high-throughput analysis in proteomics and metabolomics. The development of new separation techniques, preci...
Marc Sturm, Andreas Bertsch, Clemens Gröpl, A...
APCCM
2007
13 years 11 months ago
Merging Dynamic Functionality: Integration of XML Transformations
Integration of XML data is an increasingly important problem and many methods have recently been developed. In this talk, we examine the related and more challenging task of how t...
James Bailey, Ce Dong