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FOIS
2006
13 years 10 months ago
Modular Ontology Design Using Canonical Building Blocks in the Biochemistry Domain
The field of BioInformatics has become a major venue for the development and application of computational ontologies. Ranging from controlled vocabularies to annotation of experim...
Christopher J. Thomas, Amit P. Sheth, William S. Y...
FOIS
2006
13 years 10 months ago
Simultaneous Events and the "Once-Only" Effect
Abstract. Some events recur, and some happen only once. Galton refers to the latter as "once-only" events [1]. In a first-order logic of events that makes a type-token di...
Haythem O. Ismail
BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
Comparing sequences without using alignments: application to HIV/SIV subtyping
Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
AML
2006
120views more  AML 2006»
13 years 8 months ago
On the infinite-valued Lukasiewicz logic that preserves degrees of truth
Lukasiewicz's infinite-valued logic is commonly defined as the set of formulas that take the value 1 under all evaluations in the Lukasiewicz algebra on the unit real interva...
Josep Maria Font, Àngel J. Gil, Antoni Torr...
BMCBI
2006
159views more  BMCBI 2006»
13 years 8 months ago
Prediction of protein continuum secondary structure with probabilistic models based on NMR solved structures
Background: The structure of proteins may change as a result of the inherent flexibility of some protein regions. We develop and explore probabilistic machine learning methods for...
Mikael Bodén, Zheng Yuan, Timothy L. Bailey