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NAR
2011
191views Computer Vision» more  NAR 2011»
13 years 22 days ago
The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
Qifang Xu, Roland L. Dunbrack Jr.
SCHOLARPEDIA
2011
13 years 21 days ago
N-body simulations
Abstract. Scientists’ ability to generate and collect massive-scale datasets is increasing. As a result, constraints in data analysis capability rather than limitations in the av...
EMNLP
2011
12 years 9 months ago
Unsupervised Dependency Parsing without Gold Part-of-Speech Tags
We show that categories induced by unsupervised word clustering can surpass the performance of gold part-of-speech tags in dependency grammar induction. Unlike classic clustering ...
Valentin I. Spitkovsky, Hiyan Alshawi, Angel X. Ch...
WWW
2011
ACM
13 years 4 months ago
Counting triangles and the curse of the last reducer
The clustering coefficient of a node in a social network is a fundamental measure that quantifies how tightly-knit the community is around the node. Its computation can be reduce...
Siddharth Suri, Sergei Vassilvitskii
BMCBI
2011
13 years 1 months ago
RAG: An Update to the RNA-As-Graphs Resource
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
Joseph A. Izzo, Namhee Kim, Shereef Elmetwaly, Tam...