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NAR
2011
191views Computer Vision» more  NAR 2011»
14 years 6 months ago
The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
Qifang Xu, Roland L. Dunbrack Jr.
SCHOLARPEDIA
2011
14 years 6 months ago
N-body simulations
Abstract. Scientists’ ability to generate and collect massive-scale datasets is increasing. As a result, constraints in data analysis capability rather than limitations in the av...
EMNLP
2011
14 years 2 months ago
Unsupervised Dependency Parsing without Gold Part-of-Speech Tags
We show that categories induced by unsupervised word clustering can surpass the performance of gold part-of-speech tags in dependency grammar induction. Unlike classic clustering ...
Valentin I. Spitkovsky, Hiyan Alshawi, Angel X. Ch...
WWW
2011
ACM
14 years 10 months ago
Counting triangles and the curse of the last reducer
The clustering coefficient of a node in a social network is a fundamental measure that quantifies how tightly-knit the community is around the node. Its computation can be reduce...
Siddharth Suri, Sergei Vassilvitskii
BMCBI
2011
14 years 6 months ago
RAG: An Update to the RNA-As-Graphs Resource
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
Joseph A. Izzo, Namhee Kim, Shereef Elmetwaly, Tam...