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COCOON
2007
Springer
14 years 4 months ago
Seed-Based Exclusion Method for Non-coding RNA Gene Search
Given an RNA family characterized by conserved sequences and folding constraints, the problem is to search for all the instances of the RNA family in a genomic database. As seed-ba...
Jean-Eudes Duchesne, Mathieu Giraud, Nadia El-Mabr...
COCOON
2007
Springer
14 years 4 months ago
Algorithms for Core Stability, Core Largeness, Exactness, and Extendability of Flow Games
In this paper, we give linear time algorithms to decide core stability, core largeness, exactness, and extendability of flow games on uniform networks (all edge capacities are 1)....
Qizhi Fang, Rudolf Fleischer, Jian Li, Xiaoxun Sun
COCOON
2007
Springer
14 years 4 months ago
On the Complexity of Finding an Unknown Cut Via Vertex Queries
We investigate the problem of finding an unknown cut through querying vertices of a graph G. Our complexity measure is the number of submitted queries. To avoid some worst cases, ...
Peyman Afshani, Ehsan Chiniforooshan, Reza Dorrigi...
CPM
2007
Springer
185views Combinatorics» more  CPM 2007»
14 years 4 months ago
Algorithms for Computing the Longest Parameterized Common Subsequence
In this paper, we revisit the classic and well-studied longest common subsequence (LCS) problem and study some new variants, first introduced and studied by Rahman and Iliopoulos ...
Costas S. Iliopoulos, Marcin Kubica, M. Sohel Rahm...
GECCO
2007
Springer
177views Optimization» more  GECCO 2007»
14 years 4 months ago
Evolutionary algorithms and matroid optimization problems
We analyze the performance of evolutionary algorithms on various matroid optimization problems that encompass a vast number of efficiently solvable as well as NP-hard combinatoria...
Joachim Reichel, Martin Skutella