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CPHYSICS
2007
84views more  CPHYSICS 2007»
13 years 9 months ago
Simulating botulinum neurotoxin with constant pH molecular dynamics in Generalized Born implicit solvent
A new method was proposed by Mongan et al for constant pH molecular dynamics simulation and was implemented in AMBER 8 package. Protonation states are modeled with different char...
Yongzhi Chen, Xin Chen, Yuefan Deng
CPHYSICS
2007
437views more  CPHYSICS 2007»
13 years 9 months ago
Python: a language for computational physics
Python is a relatively new computing language, created by Guido van Rossum (Tanenbaum et al, 1990), which is particularly suitable for teaching a course in computational physics. ...
P. H. Borcherds
CPHYSICS
2007
77views more  CPHYSICS 2007»
13 years 9 months ago
Low-pressure plasma generation inside slender tubes
Low pressure (<50 mTorr) argon discharges inside tubes of a few millimeters in diameter have been studied by means of one- and twodimensional particle-in-cell Monte Carlo colli...
F. Iza, J. K. Lee
CPHYSICS
2004
89views more  CPHYSICS 2004»
13 years 9 months ago
Comprehensive suite of codes for plasma-edge modelling
The various aspects of plasma-edge physics are included in a comprehensive suite of codes having applications from industrial plasmas to fusion devices. Here the basic ideas, stat...
Ralf Schneider, Xavier Bonnin, Neil McTaggart, Ale...
CPHYSICS
2004
85views more  CPHYSICS 2004»
13 years 9 months ago
Beyond benchmarking - how experiments and simulations can work together in plasma physics
There has been dramatic progress in the scope and power of plasma simulations in recent years; and because codes are generally cheaper to write, to run and to diagnose than experi...
Martin Greenwald