We present an index structure for managing weightedsequences in large databases. A weighted-sequence is defined as a two-dimensional structure where each element in the sequence i...
DNA microarray provides a powerful basis for analysis of gene expression. Data mining methods such as clustering have been widely applied to microarray data to link genes that sho...
Reversible logic has applications in quantum computing, low power CMOS, nanotechnology, optical computing, and DNA computing. The most common reversible gates are the Toffoli gate...
Dmitri Maslov, Gerhard W. Dueck, D. Michael Miller
We present a multi-dimensional indexing approach for fast sequence similarity search in DNA and protein databases. In particular, we propose effective transformations of subsequen...
This article deals with the identification of gene regulatory networks from experimental data using a statistical machine learning approach. A stochastic model of gene interactio...