In the STS-based mapping, we are requested to obtain the correct order of probes in a DNA sequence from a given set of fragments or equivalently a hybridization matrix A. It is wel...
The class of interval probe graphs is introduced to deal with the physical mapping and sequencing of DNA as a generalization of interval graphs. The polynomial time recognition al...
In this paper, we investigate the test set problem and its variations that appear in a variety of applications. In general, we are given a universe of objects to be “distinguish...
This paper concentrates on visualizing computer viruses without using virus specific signature information as a prior stage of the very important problem of detecting computer vi...
Discovering co-expressed genes and coherent expression patterns in gene expression data is an important data analysis task in bioinformatics research and biomedical applications. ...