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ICASSP
2007
IEEE
14 years 1 months ago
ML Estimation of DNA Initial Copy Number in Polymerase Chain Reaction (PCR) Processes
Estimation of DNA copy number in a given biological sample is an extremely important problem in genomics. This problem is especially challenging when the number of the DNA strands...
Haris Vikalo, Babak Hassibi, Arjang Hassibi
BMCBI
2006
139views more  BMCBI 2006»
13 years 6 months ago
DNA Molecule Classification Using Feature Primitives
Background: We present a novel strategy for classification of DNA molecules using measurements from an alpha-Hemolysin channel detector. The proposed approach provides excellent c...
Raja Tanveer Iqbal, Matthew Landry, Stephen Winter...
BMCBI
2005
93views more  BMCBI 2005»
13 years 6 months ago
Two-part permutation tests for DNA methylation and microarray data
Background: One important application of microarray experiments is to identify differentially expressed genes. Often, small and negative expression levels were clipped-off to be e...
Markus Neuhäuser, Tanja Boes, Karl-Heinz J&ou...
DAM
2007
72views more  DAM 2007»
13 years 6 months ago
Binary templates for comma-free DNA codes
Arita and Kobayashi proposed a method for constructing comma-free DNA codes using binary templates, and showed that the separation d of any such binary template of length n satisï...
Oliver D. King, Philippe Gaborit
BMCBI
2007
247views more  BMCBI 2007»
13 years 6 months ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai