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BMCBI
2006
117views more  BMCBI 2006»
13 years 8 months ago
Gene Designer: a synthetic biology tool for constructing artificial DNA segments
Background: Direct synthesis of genes is rapidly becoming the most efficient way to make functional genetic constructs and enables applications such as codon optimization, RNAi re...
Alan Villalobos, Jon E. Ness, Claes Gustafsson, Je...
BMCBI
2005
169views more  BMCBI 2005»
13 years 8 months ago
An adaptive method for cDNA microarray normalization
Background: Normalization is a critical step in analysis of gene expression profiles. For duallabeled arrays, global normalization assumes that the majority of the genes on the ar...
Yingdong Zhao, Ming-Chung Li, Richard Simon
ISBRA
2007
Springer
14 years 2 months ago
Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach
The ability to measure bacterial diversity is a prerequisite for the systematic study of bacterial biogeography and ecology. In this paper we describe a method of estimating divers...
Frederick Cohan, Danny Krizanc, Yun Lu
ICIAR
2007
Springer
14 years 9 days ago
Processing Random Amplified Polymorphysm DNA Images Using the Radon Transform and Mathematical Morphology
Abstract. Random Amplified Polymorphism DNA (RAPD) analysis is a wellknown method for studying genetic relationships between individuals. In this context, processing the underlying...
Luis Rueda, Omar Uyarte, Sofia Valenzuela, Jaime R...
DISOPT
2007
93views more  DISOPT 2007»
13 years 8 months ago
A polynomial time equivalence between DNA sequencing and the exact perfect matching problem
We investigate the computational complexity of a combinatorial problem that arises in DNA sequencing by hybridization: The input consists of an integer together with a set S of wo...
Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak...