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BIOINFORMATICS
2006
89views more  BIOINFORMATICS 2006»
13 years 11 months ago
Maximum significance clustering of oligonucleotide microarrays
Affymetrix high-density oligonucleotide microarrays measure expression of DNA transcripts using probesets, i.e. multiple probes per transcript. Usually, these multiple measurement...
Dick de Ridder, Frank J. T. Staal, Jacques J. M. v...
BMCBI
2006
109views more  BMCBI 2006»
13 years 11 months ago
HaploRec: efficient and accurate large-scale reconstruction of haplotypes
Background: Haplotypes extracted from human DNA can be used for gene mapping and other analysis of genetic patterns within and across populations. A fundamental problem is, howeve...
Lauri Eronen, Floris Geerts, Hannu Toivonen
BMCBI
2007
84views more  BMCBI 2007»
13 years 11 months ago
A comparative study of S/MAR prediction tools
Background: S/MARs are regions of the DNA that are attached to the nuclear matrix. These regions are known to affect substantially the expression of genes. The computer prediction...
Kenneth Evans, Sascha Ott, Annika Hansen, Georgy K...
BMCBI
2005
83views more  BMCBI 2005»
13 years 10 months ago
Genome-wide estimation of gender differences in the gene expression of human livers: Statistical design and analysis
Background: Gender differences in gene expression were estimated in liver samples from 9 males and 9 females. The study tested 31,110 genes for a gender difference using a design ...
Robert R. Delongchamp, Cruz Velasco, Stacey Dial, ...
JUCS
2007
106views more  JUCS 2007»
13 years 10 months ago
An Ontology-based Approach to Support Text Mining and Information Retrieval in the Biological Domain
: This paper describes an ontology-based approach aiming at helping biologists to annotate their documents and at facilitating their information retrieval task. Our approach, based...
Khaled Khelif, Rose Dieng-Kuntz, Pascal Barbry