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» eGIFT: Mining Gene Information from the Literature
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CIS
2004
Springer
14 years 1 months ago
Mining Medline for New Possible Relations of Concepts
Scientific bibliographies in online databases provide a rich source of information for scientists in support of their research. In this paper, we propose a new method to predict po...
Wei Huang, Yoshiteru Nakamori, Shouyang Wang, Tiej...
BMCBI
2008
105views more  BMCBI 2008»
13 years 7 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
KDD
2005
ACM
151views Data Mining» more  KDD 2005»
14 years 8 months ago
Discovering evolutionary theme patterns from text: an exploration of temporal text mining
Temporal Text Mining (TTM) is concerned with discovering temporal patterns in text information collected over time. Since most text information bears some time stamps, TTM has man...
Qiaozhu Mei, ChengXiang Zhai
BMCBI
2008
158views more  BMCBI 2008»
13 years 7 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
RECOMB
2007
Springer
14 years 8 months ago
Learning Gene Regulatory Networks via Globally Regularized Risk Minimization
Learning the structure of a gene regulatory network from time-series gene expression data is a significant challenge. Most approaches proposed in the literature to date attempt to ...
Yuhong Guo, Dale Schuurmans