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BMCBI
2006
74views more  BMCBI 2006»
13 years 11 months ago
An unsupervised classification scheme for improving predictions of prokaryotic TIS
Background: Although it is not difficult for state-of-the-art gene finders to identify coding regions in prokaryotic genomes, exact prediction of the corresponding translation ini...
Maike Tech, Peter Meinicke
BMCBI
2006
107views more  BMCBI 2006»
13 years 11 months ago
Evaluation of methods for oligonucleotide array data via quantitative real-time PCR
Background: There are currently many different methods for processing and summarizing probelevel data from Affymetrix oligonucleotide arrays. It is of great interest to validate t...
Li-Xuan Qin, Richard P. Beyer, Francesca N. Hudson...
BMCBI
2007
110views more  BMCBI 2007»
13 years 11 months ago
Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy
Background: The design of long oligonucleotides for spotted DNA microarrays requires detailed attention to ensure their optimal performance in the hybridization process. The main ...
Guangan Hu, Manuel Llinás, Jingguang Li, Pe...
BMCBI
2004
211views more  BMCBI 2004»
13 years 10 months ago
GenomeViz: visualizing microbial genomes
Background: An increasing number of microbial genomes are being sequenced and deposited in public databases. In addition, several closely related strains are also being sequenced ...
Rohit Ghai, Torsten Hain, Trinad Chakraborty
SODA
2007
ACM
123views Algorithms» more  SODA 2007»
14 years 9 days ago
Region-fault tolerant geometric spanners
We introduce the concept of region-fault tolerant spanners for planar point sets, and prove the existence of region-fault tolerant spanners of small size. For a geometric graph G ...
Mohammad Ali Abam, Mark de Berg, Mohammad Farshi, ...