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    ALMOB
    2006
    109views more  ALMOB 2006»
    A novel functional module detection algorithm for protein-protein interaction networks
    13 years 9 months ago
    A novel functional module detection algorithm for protein-protein interaction networks
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    Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
    Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
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    ALMOB
    2006
    138views more  ALMOB 2006»
    A combinatorial optimization approach for diverse motif finding applications
    13 years 9 months ago
    A combinatorial optimization approach for diverse motif finding applications
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    Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
    Elena Zaslavsky, Mona Singh
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    ALMOB
    2006
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    Mining, compressing and classifying with extensible motifs
    13 years 9 months ago
    Mining, compressing and classifying with extensible motifs
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    Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
    Alberto Apostolico, Matteo Comin, Laxmi Parida
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    ALMOB
    2006
    110views more  ALMOB 2006»
    Computing distribution of scale independent motifs in biological sequences
    13 years 9 months ago
    Computing distribution of scale independent motifs in biological sequences
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    The use of Chaos Game Representation (CGR) or its generalization, Universal Sequence Maps (USM), to describe the distribution of biological sequences has been found objectionable ...
    Jonas S. Almeida, Susana Vinga
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    ALMOB
    2006
    89views more  ALMOB 2006»
    On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
    13 years 9 months ago
    On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
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    Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the ...
    Katharina Anna Lehmann, Michael Kaufmann, Stephan ...
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