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BMCBI
2007
105views more  BMCBI 2007»
13 years 10 months ago
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences
Background: The secondary structure of an RNA must be known before the relationship between its structure and function can be determined. One way to predict the secondary structur...
Stefan Engelen, Fariza Tahi
BMCBI
2007
94views more  BMCBI 2007»
13 years 10 months ago
False positive reduction in protein-protein interaction predictions using gene ontology annotations
Background: Many crucial cellular operations such as metabolism, signalling, and regulations are based on protein-protein interactions. However, the lack of robust protein-protein...
Mahmood A. Mahdavi, Yen-Han Lin
BMCBI
2005
93views more  BMCBI 2005»
13 years 10 months ago
Multiple sequence alignment accuracy and evolutionary distance estimation
Background: Sequence alignment is a common tool in bioinformatics and comparative genomics. It is generally assumed that multiple sequence alignment yields better results than pai...
Michael S. Rosenberg
ECCC
2007
147views more  ECCC 2007»
13 years 9 months ago
Inapproximability of edge-disjoint paths and low congestion routing on undirected graphs
In the undirected Edge-Disjoint Paths problem with Congestion (EDPwC), we are given an undirected graph with V nodes, a set of terminal pairs and an integer c. The objective is to...
Matthew Andrews, Julia Chuzhoy, Venkatesan Guruswa...
EMNLP
2007
13 years 11 months ago
Hierarchical System Combination for Machine Translation
Given multiple translations of the same source sentence, how to combine them to produce a translation that is better than any single system output? We propose a hierarchical syste...
Fei Huang, Kishore Papineni