Sciweavers

ECCB
2008
IEEE
13 years 11 months ago
Temporal logic patterns for querying dynamic models of cellular interaction networks
Abstract: Models of the dynamics of cellular interaction networks have become increasingly larger in recent years. Formal verification based on model checking provides a powerful t...
Pedro T. Monteiro, Delphine Ropers, Radu Mateescu,...
BICOB
2010
Springer
13 years 11 months ago
Integrative Biomarker Discovery for Breast Cancer Metastasis from Gene Expression and Protein Interaction Data Using Error-toler
Biomarker discovery for complex diseases is a challenging problem. Most of the existing approaches identify individual genes as disease markers, thereby missing the interactions a...
Rohit Gupta, Smita Agrawal, Navneet Rao, Ze Tian, ...
ASM
2010
ASM
13 years 11 months ago
Matelas: A Predicate Calculus Common Formal Definition for Social Networking
This paper presents Matelas, a B predicate calculus definition for social networking, modelling social-network content, privacy policies, social-networks friendship relations, and ...
Néstor Cataño, Camilo Rueda
CIBCB
2009
IEEE
14 years 18 days ago
An application of the metric access methods to the mass spectrometry data
Mass spectrometry is a very popular method for protein and peptide identification nowadays. Abundance of data generated in this way grows exponentially every year and although ther...
Jiri Novák, David Hoksza
CIBCB
2009
IEEE
14 years 18 days ago
Application of machine learning approaches on quantitative structure activity relationships
Machine Learning techniques are successfully applied to establish quantitative relations between chemical structure and biological activity (QSAR), i.e. classify compounds as activ...
Mariusz Butkiewicz, Ralf Mueller, Danilo Selic, Er...
CIBCB
2009
IEEE
14 years 18 days ago
DDPIn - Distance and density based protein indexing
Protein structure similarity and classification methods have many applications in protein function prediction and associated fields (e.g. drug discovery). In this paper, we propose...
David Hoksza
CIBCB
2009
IEEE
14 years 18 days ago
A framework for the application of decision trees to the analysis of SNPs data
Data mining is the analysis of experimental datasets to extract trends and relationships that can be meaningful for the user. In genetic studies these techniques have revealed inte...
Linda Fiaschi, Jonathan M. Garibaldi, Natalio Kras...
CIBCB
2009
IEEE
14 years 18 days ago
rnaDesign: Local search for RNA secondary structure design
Abstract-- The RNA secondary structure design (SSD) problem is a recently emerging research topic motivated by applications such as customized drug design and the self-assembly of ...
Denny C. Dai, Herbert H. Tsang, Kay C. Wiese