WABI
2009
Springer
14 years 6 months ago
2009
Springer
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Background: Frameshift mutations in protein-coding DNA sequences produce a drastic change in the resulting protein sequence, which prevents classic protein alignment methods from ...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Recent high throughput sequencing technologies are capable of generating a huge amount of data for bacterial genome sequencing projects. Although current sequence assemblers succes...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
We present biRNA, a novel algorithm for prediction of binding sites between two RNAs based on minimization of binding free energy. Similar to RNAup approach [30], we assume the bin...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
WABI
2009
Springer
14 years 6 months ago
2009
Springer
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...