IJBRA
2010
13 years 11 months ago
2010
The TreeSAAP software has been successfully used in a variety of protein studies for identifying and characterizing adaptation in terms of shifts in the physicochemical properties ...
ICCAD
2009
IEEE
14 years 1 days ago
2009
IEEE
Computational protein design can be formulated as an optimization problem, where the objective is to identify the sequence of amino acids that minimizes the energy of a given prot...
PAMI
1998
14 years 1 months ago
1998
—This paper concerns an efficient algorithm for learning in the limit a special type of regular languages called strictly locally testable languages from positive data, and its a...
NAR
2000
14 years 2 months ago
2000
The Exon/Intron (ExInt) database incorporates information on the exon/intron structure of eukaryotic genes. Features in the database include: intron nucleotide sequence, amino aci...
NAR
2000
14 years 2 months ago
2000
The AMmtDB database (http://bio-www.ba.cnr.it:8000/ srs6/ ) has been updated by collecting the multi-aligned sequences of Chordata mitochondrial genes coding for proteins and tRNA...
NAR
2000
14 years 2 months ago
2000
AAindex is a database of numerical indices representing various physicochemical and biochemical properties of amino acids and pairs of amino acids. It consists of two sections: AA...
BMCBI
2004
14 years 2 months ago
2004
Background: Accessible surface area (ASA) or solvent accessibility of amino acids in a protein has important implications. Knowledge of surface residues helps in locating potentia...
MAGS
2007
14 years 2 months ago
2007
A protein is identified by a finite sequence of amino acids, each of them chosen from a set of 20 elements. The Protein Structure Prediction Problem is the problem of predicting...
BMCBI
2005
14 years 2 months ago
2005
Background: Protein subcellular localization is an important determinant of protein function and hence, reliable methods for prediction of localization are needed. A number of pre...
BMCBI
2005
14 years 2 months ago
2005
Background: A large number of papers have been published on analysis of microarray data with particular emphasis on normalization of data, detection of differentially expressed ge...