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BMCBI
2006
130views more  BMCBI 2006»
13 years 11 months ago
CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
Background: The incorporation of statistical models that account for experimental variability provides a necessary framework for the interpretation of microarray data. A robust ex...
Kevin A. Greer, Matthew R. McReynolds, Heddwen L. ...
BMCBI
2006
93views more  BMCBI 2006»
13 years 11 months ago
Evaluation of absolute quantitation by nonlinear regression in probe-based real-time PCR
Background: In real-time PCR data analysis, the cycle threshold (CT) method is currently the gold standard. This method is based on an assumption of equal PCR efficiency in all re...
Rasmus Goll, Trine Olsen, Guanglin Cui, Jon Florho...
BIOINFORMATICS
2006
96views more  BIOINFORMATICS 2006»
13 years 11 months ago
Joint estimation of calibration and expression for high-density oligonucleotide arrays
Motivation: The need for normalization in microarray experiments has been well documented in the literature. Currently, most analysis methods treat normalization and analysis as a...
Ann L. Oberg, Douglas W. Mahoney, Karla V. Ballman...
ENTCS
2008
82views more  ENTCS 2008»
13 years 11 months ago
A Static Analysis for Beta-Binders
We introduce a Control Flow Analysis, that statically approximates the dynamic behaviour of processes, expressed in the Beta-Binders calculus. Our analysis of a system is able to ...
Chiara Bodei
ENTCS
2008
106views more  ENTCS 2008»
13 years 11 months ago
Towards Verifying Model Transformations
In model-based software development, a complete design and analysis process involves designing the system using the design language, converting it into the analysis language, and ...
Anantha Narayanan, Gabor Karsai
DKE
2008
108views more  DKE 2008»
13 years 11 months ago
The thematic and citation landscape of Data and Knowledge Engineering
The thematic and citation structures of Data and Knowledge Engineering (DKE) (1985-2007) are identified based on text analysis and citation analysis of the bibliographic records o...
Chaomei Chen, Il-Yeol Song, Xiaojun Yuan, Jian Zha...
CORR
2010
Springer
139views Education» more  CORR 2010»
13 years 11 months ago
Pushdown Control-Flow Analysis of Higher-Order Programs
Context-free approaches to static analysis gain precision over classical approaches by perfectly matching returns to call sites-a property that eliminates spurious interprocedural...
Christopher Earl, Matthew Might, David Van Horn
CORR
2010
Springer
58views Education» more  CORR 2010»
13 years 11 months ago
Soundly Handling Static Fields: Issues, Semantics and Analysis
Although in most cases class initialization works as expected, some static fields may be read before being initialized, despite being initialized in their corresponding class init...
Laurent Hubert, David Pichardie
CORR
2010
Springer
152views Education» more  CORR 2010»
13 years 11 months ago
A Non-Null Annotation Inferencer for Java Bytecode
We present a non-null annotations inferencer for the Java bytecode language. We previously proposed an analysis to infer non-null annotations and proved it soundness and completen...
Laurent Hubert
CERA
2010
146views more  CERA 2010»
13 years 11 months ago
A Framework of Describing and Managing Engineering Analysis Modeling Knowledge for Design Validation
Engineering design is validated by engineering analysis. In the process for predicting the physical behavior of the design, the design components, physical mechanisms, etc. are id...
Yutaka Nomaguchi, Tomohiro Taguchi, Kikuo Fujita